Protein ZmYAB9
ZmYAB9 is a protein in the C2C2-YABBY family.
Information
TF Name: ZmYAB9
Species: Maize
TF Family: C2C2-YABBY
Gene Name(Synonym): YAB9
Uniprot ID: Q7X9M7
Subgenome: 2

Protein ZmYAB9

ZmYAB9 is a protein in the C2C2-YABBY family.

Overview of domains present in v5 transcripts
PF04690
Zm00001eb220660_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d013895DAPseq no logo sequence fimo position
Zm00001d013895DAPseq no logo sequence fimo position
Zm00001d013895ChIPseq no logo sequence fimo position
Zm00001d013895PChIPseq no logo sequence fimo position

Interactions where ZmYAB9 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmYAB9 is the target  
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There are 98 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb220660_T001 from maize genome v5

Amino Acid Sequence
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MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCDTVLVVSVPTSSLFKTVTVRC
GHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTTTITTAPPPANSVNNGQFHLPHSLNHPHHQSLLVDEISSAA
NPSLQLQLEQHGGLGGLILGGSRNTAAPPPPQPPAAGKGAKEPSPRANPAVNRPPEKRQRVPSAYNRFIKDEIQRIKAGN
PNISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKTTSLLPQDHQRKDGLLKEGLYAAAAAAAAHAAANMGIAPY

MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCDTVLVVSVPTSSLFKTVTVRC
GHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTTTITTAPPPANSVNNGQFHLPHSLNHPHHQSLLVDEISSAA
NPSLQLQLEQHGGLGGLILGGSRNTAAPPPPQPPAAGKGAKEPSPRANPAVNRPPEKRQRVPSAYNRFIKDEIQRIKAGN
PNISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKTTSLLPQDHQRKDGLLKEGLYAAAAAAAAHAAANMGIAPY

MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCDTVLVVSVPTSSLFKTVTVRC
GHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTTTITTAPPPANSVNNGQFHLPHSLNHPHHQSLLVDEISSAA
NPSLQLQLEQHGGLGGLILGGSRNTAAPPPPQPPAAGKGAKEPSPRANPAVNRPPEKRQRVPSAYNRFIKDEIQRIKAGN
PNISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKTTSLLPQDHQRKDGLLKEGLYAAAAAAAAHAAANMGIAPY

MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCDTVLVVSVPTSSLFKTVTVRC
GHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTTTITTAPPPANSVNNGQFHLPHSLNHPHHQSLLVDEISSAA
NPSLQLQLEQHGGLGGLILGGSRNTAAPPPPQPPAAGKGAKEPSPRANPAVNRPPEKRQRVPSAYNRFIKDEIQRIKAGN
PNISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKTTSLLPQDHQRKDGLLKEGLYAAAAAAAAHAAANMGIAPY

MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCDTVLVVSVPTSSLFKTVTVRC
GHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTTTITTAPPPANSVNNGQFHLPHSLNHPHHQSLLVDEISSAA
NPSLQLQLEQHGGLGGLILGGSRNTAAPPPPQPPAAGKGAKEPSPRANPAVNRPPEKRQRVPSAYNRFIKDEIQRIKAGN
PNISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKTTSLLPQDHQRKDGLLKEGLYAAAAAAAAHAAANMGIAPY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04690
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Nucleotide Sequence
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TCTCTCTCTCCCCCTCTCTCCTCTC...

GRMZM2G074543_T01 from maize genome v3

Amino Acid Sequence
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MHRSDVSLLLFFFLLALSLGEYDCRDEIQRIKAGNPNISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKTTSLLPQDHQR
KDGLLKEGLYAAAAAAAAHAAANMGIAPY

Nucleotide Sequence
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ACTACATTTTTCATGCTGTGCGTTA...

GRMZM2G074543_T02 from maize genome v3

Amino Acid Sequence
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MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCDTVLVVSVPTSSLFKTVTVRC
GHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTTTITTAPPPANSVNNGQFHLPHSLNHPHHQSLLVVRAWFKA
AGGAS

Nucleotide Sequence
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AACTCCTCATCCTCACTACCAACCA...

GRMZM2G074543_T03 from maize genome v3


Related TFome: pUT6111

Amino Acid Sequence
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MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCDTVLVVSVPTSSLFKTVTVRC
GHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTTTITTAPPPANSVNNGQFHLPHSLNHPHHQSLLVDEISSAA
NPSLQLQLEQHGGLGGLILGGSRNTAAPPPPQPPAAGKGAKEPSPRANPAVNRPPEKRQRVPSAYNRFIKDEIQRIKAGN
PNISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKTTSLLPQDHQRKDGLLKEGLYAAAAAAAAHAAANMGIAPY

Nucleotide Sequence
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AACTCCTCATCCTCACTACCAACCA...

GRMZM2G074543_T04 from maize genome v3

Amino Acid Sequence
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MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCDTVLVVPLSCLNLKDFHKLEG
VPGTWVQVSVPTSSLFKTVTVRCGHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTTTITTAPPPANSVNNGQF
HLPHSLNHPHHQSLLVDEISSAANPSLQLQLEQHGGLGGLILGGSRNTAAPPPPQPPAAGKGAKEPSPRANPAVNRPPEK
RQRVPSAYNRFIKDEIQRIKAGNPNISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKTTSLLPQDHQRKDGLLKEGLYAA
AAAAAAHAAANMGIAPY

Nucleotide Sequence
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AACTCCTCATCCTCACTACCAACCA...

Zm00001d013895_T001 from maize genome v4

Amino Acid Sequence
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MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCDTVLVVSVPTSSLFKTVTVRC
GHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTTTITTAPPPANSVNNGQFHLPHSLNHPHHQSLLVDEISSAA
NPSLQLQLEQHGGLGGLILGGSRNTAAPPPPQPPAAAPEKRQRVPSAYNRFIKDEIQRIKAGNPNISHREAFSAAAKNWA
HFPHIHFGLMPDHQGLKTTSLLPQDHQRKDGLLKEGLYAAAAAAAAHAAANMGIAPY

Nucleotide Sequence
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ACTCCAAACCATCAAATCACACACC...

Zm00001d013895_T002 from maize genome v4

Amino Acid Sequence
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MSSSSSSSSSSAATVFPRSPQLPPPVLVENGLTPLHQLTPVAAAAPAAEQLCYVHCYFCDTVLVVSVPTSSLFKTVTVRC
GHCSSLLTVDMRGLLFPGTPTDTVAGAAPPPAADTSTTTTTITTAPPPANSVNNGQFHLPHSLNHPHHQSLLVDEISSAA
NPSLQLQLEQHGGLGGLILGGSRNTAAPPPPQPPAAGKGAKEPSPRANPAVNRPPEKRQRVPSAYNRFIKDEIQRIKAGN
PNISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKTTSLLPQDHQRKDGLLKEGLYAAAAAAAAHAAANMGIAPY

Nucleotide Sequence
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ACTCCAAACCATCAAATCACACACC...


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